you might need some adjsutment of the Vacuum valve on the injection pump. I can't remember the numbers anymore, but the valve adjusts to get higher line pressures and better shifts. trans shop with some older experienced techs could probably help check it at least.
the 6.9 was only 175hp in stock form. a cabriolet is one heavy MF. you won't have big power even if the turbo is spooling up.
any banks turboed 7.3 idi I saw blew headgaskets and tore threads out of blocks. they must really cause havock with the little 7/16" headbolts in a 6.9?
my powerstroke clubwagon is 7000lbs empty, a cabriolet must run closer to 9000. a 6.9 is not enough!!
diesel C6s have closer ratios than gas ones.